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資源導(dǎo)航

  • 資源導(dǎo)航
  • Community analysis
1. Metaxa
Metaxa uses Hidden Markov Models to identify, extract and classify small-subunit (SSU) rRNA sequences (12S/16S/18S) of bacterial, archaeal, eukaryotic, chloroplast and mitochondrial origin in metagenomes and other large sequence sets
標簽：Metagenomics,?Phylogenetics,Sequence analysis,?Community analysis
2. Megraft
Megraft is a software tool to graft ribosomal small subunit (16S/18S) fragments from metagenomes onto full-length SSU sequences, enabling accurate diversity estimates from fragmentary and non-overlapping sequence data.
標簽：Metagenomics,?Phylogenetics,Sequence analysis,?Community analysis,?Rarefaction
3. CNB MetaGenomics tools
A number of tools and meta-tools developed at CNB/CSIC for the analysis of metagenomics data (some rely on QIIME).
標簽：Metagenomics,?Biodiversity,Community analysis,?High-throughput sequencing